User: justinyi10

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justinyi1010
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Posts by justinyi10

<prev • 6 results • page 1 of 1 • next >
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Error with spillover function
... I am trying to calculate the spillover matrix of my flowSet, but receive the following error. How to fix this? fcsFiles A flowSet with 58 experiments.   column names:   FSC-H SSC-H BL2-H BL4-H FSC-A SSC-A BL2-A BL4-A Width TIME > spillover(fcsFiles) Error: Sorry, we don't yet support unstained ...
spillover written 4 months ago by justinyi1010
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Trying to read in a gating template causes error
... I am trying to read in a gating template I created (.csv) using the following commands, however I am hit with an error. gtFile<-system.file("/Users/justinyi/Desktop/gating_template.csv",package="openCyto") gt_tcell<-gatingTemplate(gtFile, verbose = TRUE) Input contains a \n (or is ""). Takin ...
opencyto gating bioconductor written 4 months ago by justinyi1010
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Fail to load openCyto
... Hello, I am trying to load the openCyto package, however whenever I try to I receive an error message which states library("openCyto", lib.loc="/Library/Frameworks/R.framework/Versions/3.4/Resources/library") Error: package or namespace load failed for ‘openCyto’: .onLoad failed in loadNamespace ...
opencyto bioconductor written 4 months ago by justinyi1010 • updated 4 months ago by Martin Morgan ♦♦ 20k
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Install flowClust on Windows for R 3.4.1
... How do I install flowClust for Windows? I need it to load openCyto but I keep getting an error when entering the command that says there is no package called flowClust ...
flowclust written 4 months ago by justinyi1010 • updated 4 months ago by Martin Morgan ♦♦ 20k
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How to count monocytes labeled with HLA-DR?
... Hello, I am a student doing research in a laboratory. We have collected flow cytometry data but would now like to identify the number of monocytes labeled with HLA-DR using Bioconductor in R. How would I go about doing that? ...
bioinformatics bioconductor hla written 4 months ago by justinyi1010
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parseWorkspace data that hasn't been gated
... Hello, I have very recently become familiar with Bioconductor, FlowJo, and Flow Cytometry in general, so forgive me if my questions are simple. I am trying to load in FCS files that have not been gated, with the purpose of counting monocytes labeled with HLA-DR. I have loaded the FCS files into Flo ...
bioconductor written 4 months ago by justinyi1010

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