User: gpalidwor

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gpalidwor0
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Posts by gpalidwor

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Comment: C: RNASeq fold change analysis after subtraction of contaminating MEF signal
... Thanks! I'll give it a try and post this reply on Biostars. ...
written 4 months ago by gpalidwor0
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Comment: C: RNASeq fold change analysis after subtraction of contaminating MEF signal
... By "known fraction" I mean I can give a measured numeric value for each sample based on the number of cells.    ...
written 4 months ago by gpalidwor0
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RNASeq fold change analysis after subtraction of contaminating MEF signal
... I have a set of Mouse RNASeq data for various points of a differentiation time series, with replicates. A known fraction of the cells in each sample are Mouse Embryonic Fibroblasts (MEFs), that fraction varies quite a bit per sample. I have expression data for a pure MEF sample grown under similar c ...
deseq2 svaseq written 4 months ago by gpalidwor0 • updated 4 months ago by Michael Love15k

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