User: xr2120

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xr21200
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Posts by xr2120

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Comment: C: gseDO function input
... Hi Guangchuang, Thanks for your prompt response. I have figured out this issue. I checked your GitHub page, and noted that gseDO permutates the gene list to get empirical distribution of ES. I thought it permutates phenotypes. That's why I get confused. Thanks for your help.        ...
written 9 weeks ago by xr21200
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gseDO function input
... Hi all, I'm a little bit confused about the input of gseDO. In DOSE vignette, the input of gseGO is a gene list called "geneList". In this gene list, for each gene, there is a corresponding log fold change. But how can we calculate the correlation between each gene and phenotype if the input is jus ...
clusterprofiler dose written 9 weeks ago by xr21200 • updated 9 weeks ago by Guangchuang Yu700

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