User: floriandeckert

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Posts by floriandeckert

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DSS CpG coverage threshold
... Hello!  Since I do not have biological replicates I want to call DMRs with DSS. As far as I understand, first a basic smoothing is performed before using a beta-binominal GLM that takes biological and technical variance e.g. read-depth into account.  I have to admit, that I have not fully understa ...
coverage dss wgbs written 12 days ago by floriandeckert0
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makeTxDbFromBiomart error while building metadata dataframe
... Hi,  I get the following error when trying to build a TxDb object from Biomart. In the forum it is suggseted to build the a TxDb from a gft file. Anyway, I think that command should work and would apreachiate if you might help me to understand what is going wrong.  Thank you very much!!! > Ens ...
maketxdbfrombiomart written 5 weeks ago by floriandeckert0

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