User: lauren.czaplicki

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Posts by lauren.czaplicki

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Comment: A: Error bars on DESeq2 visuals
... Thanks Mike! A few follow up questions: Say I were to put the lfcSE bars on the chart without trying to build confidence intervals, what would my N be? In other words, would the lfcSE reflect the error between the starting number of communities I used for the comparison (N=6 if triplicate reactor ...
written 3 months ago by lauren.czaplicki0
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Error bars on DESeq2 visuals
... Hi Bioconductor community! I'm using DESeq2 to visualize which taxa are significantly enriched in one treatment over a control and realized that the vignette doesn't result in plots with error bars.  Is this because what the error bars represent (standard deviations) get wrapped up in DESeq2's p-va ...
metagenomics phyloseq deseq2 ggplot2 written 3 months ago by lauren.czaplicki0

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