User: maeva.mollion

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Posts by maeva.mollion

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Comment: C: GSEAbase: goSlim function, pb with counts
... Thanks a lot! It works now and the results seems more logical.  ...
written 3 days ago by maeva.mollion0
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Resolved- GSEAbase: goSlim function, pb with counts
... Hello,  I encounter a problem using goSlim function in the package GSEAbase.  I have a set of annotations (pasted below). When I use the goSlim function in order to have the counts of appearance of each Go Slim plant ontology, it seems to me that the counts are off.  I noticed it because I am int ...
go gsea goslim written 11 days ago by maeva.mollion0
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Comment: C: GSEAbase: problem with GOCollection (getAnnMap: package GO not availale)
... Thanks! It's working now that I've done that. ...
written 13 days ago by maeva.mollion0
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RESOLVED- GSEAbase: problem with GOCollection (getAnnMap: package GO not availale)
... Hello!  I am currently trying to work with goslim on a set of differentially expressed genes of which I have some ontologies.  I tried to use commands similar to those on this link https://www.rdocumentation.org/packages/GSEABase/versions/1.34.0/topics/goSlim-methods fl <- system.file("extda ...
gseabase gene ontology written 13 days ago by maeva.mollion0

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