User: abhishek.yedugondla

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DESeq estimateSizeFactors() is returning error "Error: all(!is.na(value)) is not TRUE"
... So upstream seems to be working well, I have run into an issue where the estimatesizefactors is returning a strange error. Input is: dds <- dds[ rowSums(counts(dds)) > 1, ] cts <- counts(dds) geoMeans <- apply(cts, 1, function(row) if (all(row == 0)) 0 else exp(mean(log(row[row != 0] ...
deseq2 error R estimatesizefactors zero written 6 weeks ago by abhishek.yedugondla0 • updated 6 weeks ago by Michael Love15k

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