User: Victor Goitea

gravatar for Victor Goitea
Reputation:
10
Status:
New User
Location:
United_States/Oklahoma_City/OMRF
Last seen:
3 months ago
Joined:
3 months, 2 weeks ago
Email:
g******@omrf.org

Posts by Victor Goitea

<prev • 7 results • page 1 of 1 • next >
0
votes
6
answers
201
views
6
answers
Comment: C: ChIPQC Error in .Call2 NCList object is too deep
... Hi Tom, hi Herve, Thank you very much for solve this problem and for the explanation. Best, Victor       ...
written 3 months ago by Victor Goitea10
0
votes
6
answers
201
views
6
answers
Answer: A: ChIPQC Error in .Call2 NCList object is too deep
... I shared the files by dropbox. Did you get the link? Let me know if you need something else or if there is some problem with the Dropbox. Thank you for take  a look. Best, Victor. ...
written 3 months ago by Victor Goitea10
0
votes
6
answers
201
views
6
answers
Comment: C: ChIPQC Error in .Call2 NCList object is too deep
... Two chromosomes "21"and "22" > Test2 Samples: 1 : A2_D                 Tissue Factor Treatment Replicate                      D         A2       T              1              Reads Map% Filt% Dup% ReadL FragL RelCC  SSD RiP% RiBL%    A2_D 8856458  100  10.3    0    47    95  1.12 24.9   NA     0 ...
written 3 months ago by Victor Goitea10
0
votes
6
answers
201
views
6
answers
Comment: C: ChIPQC Error in .Call2 NCList object is too deep
... I show here how the program still fail over ALL chromosomes (1:22,"X","Y") but it works running in only one chromosome. When I try two chromosomes, it depends on the chromosomes that I choose. For example, with chromosomes 21 and 22 it works but using chromosomes 1 and 2 it fails with the same error ...
written 3 months ago by Victor Goitea10
0
votes
6
answers
201
views
6
answers
Answer: A: ChIPQC Error in .Call2 NCList object is too deep
... Hi Thomas, I downgrade ChIPQC with biocLite("ChIPQC"). See the sessionInfo() and BiocInstaller::biocValid() . However, it doesn't change the behavior respect to the error.   > BiocInstaller::biocValid() [1] TRUE > sessionInfo() R version 3.4.2 (2017-09-28) Platform: x86_64-apple-darwin15 ...
written 3 months ago by Victor Goitea10
0
votes
6
answers
201
views
6
answers
Comment: C: ChIPQC Error in .Call2 NCList object is too deep
...  sessionInfo() R version 3.4.2 (2017-09-28) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: macOS Sierra 10.12.6 Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /Library/Frameworks/R. ...
written 3 months ago by Victor Goitea10
5
votes
6
answers
201
views
6
answers
ChIPQC Error in .Call2 NCList object is too deep
... Dear all, I need help to solve this error, using the latest version of ChIPQC1.15. I am not bioinformatician. I would like to give the bam file to you can reproduce the problem but I don't know how to do with such a big file.   > samples = read.csv("samples_Ours_test0.csv") SampleID      Tiss ...
chipqc written 3 months ago by Victor Goitea10 • updated 3 months ago by Thomas Carroll390

Latest awards to Victor Goitea

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 150 users visited in the last hour