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Posts by daniele.ottaviani
... Hi, I have the same problem but no idea on how so solve it. I just thought to take out from the .gtf all isoforms but the one of interest...but this way I'll lose lot of info and the "bin problem" will remain in all other genes anyway. @aditi did you manage to solve the issue then? Thanks in advan ...
... Hi, I'm trying to perform diff. splicing analysis and novel exon discovery on my RNAseq data using the ASpli package. I loaded my .bam files with: > bam <- loadBAM(targets) ...but then R gives an error while performing the counting step: > counts <- readCounts ( features, bam, ta ...
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