User: gocougs

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gocougs0
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Posts by gocougs

<prev • 7 results • page 1 of 1 • next >
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Comment: C: How do I get groseq signal for each gene from groSeq in groHMM
... Can I bug you with one final question? If I wanted to export a similar file but using groHMM called transcripts rather than knownGenes, how would I change that code? I tried switching kgLimit with txLimit and ended up getting errors that I was combining a date.frame with different lengths. Thanks ...
written 5 weeks ago by gocougs0
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Comment: C: How do I get groseq signal for each gene from groSeq in groHMM
... Thank you again, I really appreciate your help! ...
written 5 weeks ago by gocougs0
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How do I get groseq signal for each gene from groSeq in groHMM
... hello! I worked my way through the tutorial for groHMM but I'm not sure how to get signal (RPKM, FPKM etc.) for each gene.  The tutorial just shows how to make graphs. Thanks! ...
grohmm groseq written 6 weeks ago by gocougs0 • updated 6 weeks ago by anusha.nagari30
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Comment: C: error when I use groHMM on data outside of the tutorial
... THANK YOU!!!!!!! ...
written 8 weeks ago by gocougs0
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error when I use groHMM on data outside of the tutorial
... Hi, When I tried the groHMM package tutorial, I was able to get everything to work. When I try it with real data, I keep getting this error "the score must be numeric, without any NA's". I appreciate any help because I have been searching the internet and trying to figure this out on my own for sev ...
R next-generation sequencing grohmm groseq written 8 weeks ago by gocougs0
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Comment: C: ERROR: compilation failed for package RSQLite
... I updated my post. Thank you for the quick reply! ...
written 10 months ago by gocougs0
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ERROR: compilation failed for package RSQLite
... Hi. I have tried to install bioconductor and cummeRbund on my ubuntu 16.04 machine and I can't get anything to install. When I use source("https://bioconductor.org/biocLite.R") biocLite() the installation fails because RSQLite won't install. So I tried: biocLite("RSQLite") and it won't install. ...
installation ubuntu written 10 months ago by gocougs0 • updated 10 months ago by Martin Morgan ♦♦ 22k

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