User: Enzo Castillejos

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Posts by Enzo Castillejos

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Comment: C: How to perform time-course differential expression with "erroneous" baseline in
... Thanks for the comments. Enzo ...
written 3 months ago by Enzo Castillejos0
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Comment: C: How to perform time-course differential expression with "erroneous" baseline in
... Yes, "inoculated" and "infected" are synonymous. Were the control.0hai and infected.0hai samples both innoculated? = No. Control.0hai was not inoculated; inoculated.0hai was. All controls (control.0hai, control.6hai, control.12hai, control.24hai) were not infected or inoculated. I don't have any id ...
written 3 months ago by Enzo Castillejos0
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How to perform time-course differential expression with "erroneous" baseline in edgeR?
... Hi there edgeR users, I am new to edgeR so I need to get some help from the experts. We have these paired-end RNA-seq datasets between mock (control) and fungus-inoculated wheat samples collected at 0, 6, 12 and 24 hai (hours after infection), each with three reps. That is, 2 treatments (control a ...
timecourse edger differential expression written 3 months ago by Enzo Castillejos0 • updated 3 months ago by Gordon Smyth33k

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