User: martinguerrerog89
martinguerrerog89 • 20
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Posts by martinguerrerog89
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... Having the same problem here!
library(TCGAbiolinks)
library(GAIA)
project = "TCGA-PRAD"
data.category = "Copy Number Variation"
data.type = "Masked Copy Number Segment"
legacy = FALSE
sample.type = c("Primary solid Tumor")
datQuery <- GDCquery(project = project, data.category = data.category ...
written 11 months ago by
martinguerrerog89 • 20
0
votes
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... You areright @Sean, I did this in the meanwhile to help some co-workers that had the issue too, even after a fresh install of the package, I will write the issue in the GitHub repository and send the pull request, also I have updated the sessionInfo(), my bad!
Great package by the way!!
...
written 18 months ago by
martinguerrerog89 • 20
3
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... Recently the getGEO function of the package GEOquery suddenly started throwing the following error:
gse=getGEO("GSE106977",GSEMatrix=T)
#https://ftp.ncbi.nlm.nih.gov/geo/series/GSE106nnn/GSE106977/matrix/
#OK
#Found 2 file(s)
#/geo/series/GSE106nnn/GSE106977/
#Error in d ...
written 18 months ago by
martinguerrerog89 • 20
Latest awards to martinguerrerog89
Popular Question
10 months ago,
created a question with more than 1,000 views.
For Patch for GEOquery package error: getGEO Error in download.file, cannot open destfile
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