The support.bioconductor.org editor has been updated to markdown! Please see more info at: Tutorial: Updated Support Site Editor

User: hihi.joshi

gravatar for hihi.joshi
hihi.joshi0
Reputation:
0
Status:
New User
Last seen:
1 year ago
Joined:
1 year ago
Email:
h*********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by hihi.joshi

<prev • 2 results • page 1 of 1 • next >
1
vote
1
answer
305
views
1
answers
Answer: A: Ensembl transcripts returned by getBM not matching the biomart website
... Okay ... I just realised what I was doing incorrectly. Gene name and HGNC symbol are two distinctly different fields in the biomart dataset. I was retrieving hgnc_symbol via getBM and gene_name via Biomart web interface. Once I fixed the getBM to ensure the exact same fields are being retrieved, ...
written 12 months ago by hihi.joshi0
1
vote
1
answer
305
views
1
answer
Ensembl transcripts returned by getBM not matching the biomart website
... Hi,  I am writing a workflow to extract Ensembl transcripts using the getBM facility. This is a portion of the code. library(biomaRt) library(AnnotationHub) library(TxDb.Hsapiens.UCSC.hg19.knownGene) rm(list=ls()) ensembl_mart <- useMart(biomart="ENSEMBL_MART_ENSEMBL", host="grch37.ensembl.o ...
biomart ensembl getbm transcripts written 12 months ago by hihi.joshi0

Latest awards to hihi.joshi

Scholar 12 months ago, created an answer that has been accepted. For A: Ensembl transcripts returned by getBM not matching the biomart website

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 270 users visited in the last hour