User: seyfim

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seyfim0
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Posts by seyfim

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tximport error with Salmon in DESeq2 pipeline
... Hello, I am following the Analyzing RNA-seq data with DESeq2 guide by Michael Love, Simon Anders and Wolfgang Huber 2018 here is my command that is throwing me an error: txi<-tximport(filez, type=c("salmon"), tx2gene=tx2gene)  Here is the error: reading in files 1 Error in read.table(file = ...
deseq2 salmon tximport written 9 months ago by seyfim0 • updated 9 months ago by Michael Love20k
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cummeRbund MA plot and csScatter error
... I am attempting to run MAplot(), csScatter  and  plot functions using the cuff object created from readCufflinks tool in the cummeRbund package and I am getting the following error:  Sometimes this error does not occur and I get a blank graph The other plotting functions worked fine (dispersionPlo ...
cummerbund written 9 months ago by seyfim0

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