User: mario.zanfardino

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Naples (Italy)
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I'm a Bioinformatician. For details go to:

https://www.linkedin.com/in/mario-zanfardino-0b94734b/

Posts by mario.zanfardino

<prev • 41 results • page 1 of 5 • next >
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... Now run. After R session restarting. Thank you! ...
written 5 months ago by mario.zanfardino150
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... Hi Marcel,  the 1.7.21 version returns with the same error: Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent ...
written 5 months ago by mario.zanfardino150
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... Good! thank you again Marcel! This version is already available? ...
written 5 months ago by mario.zanfardino150
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... #CODE TO GENERATE MY DATA library("curatedTCGAData") library("SummarizedExperiment") library("MultiAssayExperiment") ## Downolad MAE BRCA data BRCA_TCGA <- curatedTCGAData(diseaseCode = "BRCA", assays = c("miRNASeqGene", "RNASeqGene"), ...
written 5 months ago by mario.zanfardino150
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... #CODE TO GENERATE MY DATA library("curatedTCGAData") library("SummarizedExperiment") library("MultiAssayExperiment") ## Downolad MAE BRCA data BRCA_TCGA <- curatedTCGAData(diseaseCode = "BRCA", assays = c("miRNASeqGene", "RNASeqGene"), ...
written 5 months ago by mario.zanfardino150
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... With only subsetting no error is generated! but with 1:107 wideformat runs! (and also this  do not exist in some of my experiments) ! ...
written 5 months ago by mario.zanfardino150
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5 follow
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MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
... I have the following MAE:​ > data A MultiAssayExperiment object of 4 listed experiments with user-defined names and respective classes. Containing an ExperimentList class object of length 4: [1] BRCA_miRNASeqGene-20160128: SummarizedExperiment with 500 rows and 65 columns [2] BRCA_RNASeqGene-20 ...
tcga multiassayexperiment wide format written 5 months ago by mario.zanfardino150 • updated 5 months ago by Marcel Ramos ♦♦ 360
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Comment: C: MultiAssayExperiment:combine two multiassayexperiment object
... Thank you very much Marcel! ...
written 6 months ago by mario.zanfardino150
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MultiAssayExperiment:combine two multiassayexperiment object
... how can i combine two multiassayexperiment object without using Experiment extraction and subsequently combination in MAE? Example:  > MAE1 A MultiAssayExperiment object of 2 listed experiments with user-defined names and respective classes. Containing an ExperimentList class object of leng ...
multiassayexperiment written 6 months ago by mario.zanfardino150 • updated 6 months ago by Marcel Ramos ♦♦ 360
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Comment: C: MultiAssayExperiment: how can i change name of a experiment in a multiassayexper
... Thank you, now runs! ...
written 6 months ago by mario.zanfardino150

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