User: Ni-Ar

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Ni-Ar0
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Posts by Ni-Ar

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Counting reads in fixed width peaks with DiffBind::dba.count without re-centering?
... Hello, I'm using DiffBind version 2.6.6 to do ChIP-seq differential binding analysis for a transcription factor that binds at genes transcription start sites (TSS).  I generated the peaks intervals with MACS2 and since I'm specifically interested only in TSS regions I used bedtools interesect  to ...
chipseq diffbind counts bedtools peaks written 15 months ago by Ni-Ar0 • updated 14 months ago by Rory Stark2.8k

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