User: guyho

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guyho10
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4 months, 2 weeks ago
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6 months ago
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g****@technion.ac.il

Posts by guyho

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Comment: C: Extracting custom post-normalization counts from DESeq2
... I understand it now, thanks again for the help.  ...
written 5 months ago by guyho10
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Comment: C: Extracting custom post-normalization counts from DESeq2
... Hi Michael, I think that  lm(ncts ~ w1)$residual + mean(ncts) ignores the differences that are due to experimental conditions If I correctly understand, would't the following plot the ruv corrected values?   plot(lm(ncts ~ W1+conditions)$fitted.values ~ condition, ylab="normalized, RUV-corrected cou ...
written 5 months ago by guyho10
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Comment: C: Extracting custom post-normalization counts from DESeq2
... Hi Michael, Thank you very much for the quick response. I learn a lot from your posts. Guy  ...
written 5 months ago by guyho10
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Comment: C: Extracting custom post-normalization counts from DESeq2
... Hi Michael, I would like to follow up on this issue. Is there any progress with this feature. Is it possible to provide a small demo how to visualize the normalized+regressed counts? Thanks in advance. Guy ...
written 5 months ago by guyho10

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