User: marhabaie

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marhabaie0
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Posts by marhabaie

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DE analysis when large portion of transcriptome is changed
... I have done several DE analyses at gene and transcript levels using edgeR and EBSeq and I found ~30% of transcriptome (~2100 genes out of ~7000, and ~3300 transcripts out of ~11000) is depleted from my experimental samples. The total read counts for these genes is about 5 million reads (out of ~17 m ...
edger ebseq differential expression rna-seq written 17 months ago by marhabaie0 • updated 17 months ago by Aaron Lun25k

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