User: Kaperuza

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Kaperuza0
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Posts by Kaperuza

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Comment: C: How do you specify "chip" in printGenes of TopGO for maize data
... Thank you James for your feedback. The original file of the new GO annotation lists all the GO terms associated to each gene, as shown below. To assign the gene names to my significant results I have to first parse out from this annotation the genes (and their GO terms) for each of my lists of DEGs ...
written 6 months ago by Kaperuza0
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How do you specify "chip" in printGenes of TopGO for maize data
... Hello! I am using TopGO to analyze different lists of DEGs from maize obtained via analysis of RNA-seq data.  With the script below I get the list of overrepresented terms for the CC annotations. So far so good. Now I would like to print out the significant genes associated with each of the overr ...
topgo printgenes written 7 months ago by Kaperuza0 • updated 7 months ago by James W. MacDonald49k

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