User: es.azadian

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es.azadian0
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Posts by es.azadian

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Unusual graph for Identifying HVGs from the normalized log-expression
... Hello to everyone, I've followed the "A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor, V2" for my own data. The problem is that when I produce the graph for Variance of normalized log-expression values (using trendVar and decomposeVar functions), my plot ...
workflows simplesinglecell written 14 months ago by es.azadian0 • updated 14 months ago by Aaron Lun25k
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Problem with finding mitochondrial genes in a human single cell RNA-Seq readCounts file
... I am trying to find a way to conveniently recognize mitochondrial genes in a csv file, which is a readcounts for single-seq RNA-Seq data obtaiened from human. The workflow that I’m working with (https://f1000research.com/articles/5-2122/v2) has used the following command: is.mito <- grepl("^mt- ...
rnaseq mitochondria single-cell written 14 months ago by es.azadian0 • updated 14 months ago by Aaron Lun25k

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