User: yusuf.zhc

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yusuf.zhc0
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Posts by yusuf.zhc

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Comment: C: DESeq2 design confusion with three factors
... so what is the final solution you got? I am dealing with 2 treatment types, 2 response type, 2 tissue type, and 4-time points. It would be very helpful for me.  ...
written 9 weeks ago by yusuf.zhc0
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Comment: C: deseq2 analysis multiple factor and 4 different time points
... thank you for your reply. I understand how to give concatenated subsets but i am not able to add time course into that. how should i compare then.  ...
written 9 weeks ago by yusuf.zhc0
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deseq2 analysis multiple factor and 4 different time points
... I have multifactor data 1. Participants are healthy population, having both males and females. 2. different excersice intensity for different legs. few participanrts have high intensity on left and low intensity in right, and few have high intensity of right and low in left. 3. samples were taken ...
differential gene expression bias edger and deseq2 written 9 weeks ago by yusuf.zhc0 • updated 9 weeks ago by swbarnes250
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Comment: C: deseq2 analysis multiple condition
... we have count data from htseq and rsem.  I have different factors and also time course data so confused to make data frame. 1. Participants are both male and female. no control group all are healthy. 2. Samples are taken from both legs at 4-time points. (0-2-3-12) weeks 3. Few participants have ...
written 9 weeks ago by yusuf.zhc0
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Comment: C: deseq2 analysis multiple condition
... i have edited my question. i am trying to group data by factors it is design but we also have time points how to add that here i am struck.  ...
written 9 weeks ago by yusuf.zhc0

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