## User: Firas

Firas0
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#### Posts by Firas

<prev • 11 results • page 1 of 2 • next >
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... It turns out that the rendering system of the Bioconductor support site for the LaTex equations, at least on my system, is messing up the format. What appears to be group = p *e (condition,day) is actually group=paste(condition,day). ...
written 4 weeks ago by Firas0
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... I am sure that everyone appreciates both the time and the efforts you're putting here. So, thank you for this. I totally understand that you might not have the time to comment on specific questions beyond the level of software support. For me personally, I really think that it is useful to discuss ...
written 4 weeks ago by Firas0
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... Many thanks, Michael, once again for your help. I have been enjoying some background reading to avoid asking further questions (without any clue) and here is the complete code which I arrived at. # construct the samples list Replicate <- factor(rep(1:3,times=8)) Day < ...
written 5 weeks ago by Firas0
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... Well, that is exactly what I have. Control (time 0) is the baseline measurement for both conditions. I don't have two controls (I just duplicated it as Sham_0 and Injury_0). Then Sham is treated with surgery, and Injury is treated with surgery and injury. Day0 Control ...
written 6 weeks ago by Firas0
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... Thanks again for your help. It must be something that I am doing wrong. Because in my case there are no columns with all zeros. So, this is my samples list (note that I replicated the control as Sham_0 and Injury_0) Sample Replicate Condition Day Sham_0_1 1 Sham 0 Sham_0_ ...
written 7 weeks ago by Firas0
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... Thank you very much, Michael, for your reply. How do you remove the column for injury at time 0? mm <- model.matrix(~ condition + day + condition:day) # or mm <- model.matrix(~ condition + day + condition:day, coldata) Executing the above code does not result in a column for in ...
written 7 weeks ago by Firas0
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... I am working with a similar dataset to the one of the OP. Is there any chance to elaborate more on how to do: > One use of the control group might be as a baseline for effect sizes - so if you set up a group = p ∗ e (condition,day) condition, and relevelled it so control was the baseline, you c ...
written 7 weeks ago by Firas0
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Comment: C: Rhdf5lib install problems
... I am having the same problem. Is there any chance for some help in order to debug this error? Tried compiling on CentOS 6.2 and Gentoo. Log: `sh CC H5PL.lo CC H5PLint.lo CC H5PLpath.lo In file included from H5PLpath.c:42: H5PLpath.c: In function 'H5PL__create_path_table': ...
written 7 months ago by Firas0
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... @Nicolas, Thanks for the bug report and the fix. @Thomas, I submitted a pull request containing Nicolas' fix. Best wishes ...
written 8 months ago by Firas0
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... Thank you very much, Rory, for your swift reply.  This is exactly what I want. Best wishes, Firas ...
written 14 months ago by Firas0

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