User: TRASA

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TRASA0
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Posts by TRASA

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Comment: C: Somatic Signature only SNV supported
... No, there is no reason. I must have completely missed that. Sorry for bothering you with such a stupid mistake... ...
written 5 months ago by TRASA0
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Comment: C: Somatic Signature only SNV supported
... I loaded following libraries library(SomaticSignatures) library(SomaticCancerAlterations) library(BSgenome.Hsapiens.1000genomes.hs37d5) And then run following code (including output) > sca_data = unlist(scaLoadDatasets()) > > sca_data$study = factor(gsub("(.*)_(.*)", "\\1", toupper(na ...
written 5 months ago by TRASA0
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Somatic Signature only SNV supported
...   Hi I am using the Bioconductor package SomaticSignatures. Since I am very new to NSG anaysis, I tried to reproduce the example used in the Read.me of the package. However, I run into some problems when extracting the sequence context (Section 4.2). I got the following error message. Error in m ...
somaticsignatures written 5 months ago by TRASA0

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