User: mogasawara

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mogasawara0
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Posts by mogasawara

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Comment: C: Getting an error trying to do tximportData tutorial
... Oh, I see, thank you very much. Yes, I did observe that NAs but I didn't understand that was the cause of my error. I was assuming that with the factor(), we could change the names. I was looking at the Conditions column that had "A" and "B" and so I thought for some reason it would change to "untre ...
written 11 months ago by mogasawara0
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Getting an error trying to do tximportData tutorial
... Hello, I am working through the "Analyzing RNA-seq data with DESeq2"  and have installed the 'tximportData' package. I am getting an error when I am setting the Factor; I've tried factor(), relevel() each individually and also both (which I'm assuming we wouldn't need to) but came across the same e ...
deseq2 tximport written 11 months ago by mogasawara0 • updated 11 months ago by Michael Love25k
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Comment: C: Tximport with RSEM error
... Thank you so much for your help! I was so frustrated on what to do but now I have all 9 files imported.  ...
written 11 months ago by mogasawara0
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Comment: C: Tximport with RSEM error
... I came across this question because I am similarly confused with using tximport (and very new to R in general). I am working on a class project and what I have are RSEM files which I would like to do further analysis with DESeq2. I'm having problems with reading in the files. The rsem txt files whic ...
written 11 months ago by mogasawara0

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