User: justinkablan225

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Posts by justinkablan225

<prev • 9 results • page 1 of 1 • next >
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Print Differentially Expressed Exons From Dexseq Results
... Hello, I'm trying to do some differential expressed exons analysis with DEXSeq package. I got DEXSeq results by : > dxr1 = DEXSeqResults( dxdEFC, padj=0.1 ) Then, I'm looking for print only Up-regulate or Down-regulate exons significantly expressed. Therefore, ...
dexseq rna-seq written 3 months ago by justinkablan2250 • updated 3 months ago by Alejandro Reyes1.7k
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Comment: C: How to install DEXSeq on R 3.4.4
... Work nicely now ...
written 4 months ago by justinkablan2250
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Comment: C: How to install DEXSeq on R 3.4.4
... Thinks, I tried this but don't work ...
written 4 months ago by justinkablan2250
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How to install DEXSeq on R 3.4.4
... Hello, I want to install DEXSeq on linux mint 18.3 > sessionInfo() R version 3.4.4 (2018-03-15) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Linux Mint 18.3 ...
dexseq linux written 4 months ago by justinkablan2250 • updated 4 months ago by Alejandro Reyes1.7k
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Comment: C: Rsubread installation failed
... I try Linux system and I got success with Rsubread  package installation in R. It  works well. Thanks you. ...
written 9 months ago by justinkablan2250
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Data import with read.delim
... Hello, I've more of 2 exactly 8 file of RNA data that I must import and analyze them with limma. But, I've some problems to import all data within one script. What I done is: j <- read.delim("1.txt","2.txt","3.txt","4.txt","5.txt","6.txt","7.txt","8.txt", sep = "\t") Error in match.arg(numera ...
limma rsubread written 9 months ago by justinkablan2250 • updated 9 months ago by Gordon Smyth38k
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Comment: C: RNA-seq analysis using R
... Hi I done some mistakes in my message but now I begin to understand better more. Thus, I'm a Bioconductor tool user. Best regard ...
written 9 months ago by justinkablan2250
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Rsubread installation failed
... Hi !  I've a problem with Rsubread package installation. > if (!requireNamespace("BiocManager", quietly = TRUE)) + install.packages("BiocManager") > BiocManager::install("Rsubread", version = "3.8") Bioconductor version 3.8 (BiocManager 1.30.4), R 3.5.1 (2018-07-02) Installing package(s ...
R package installation written 9 months ago by justinkablan2250
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RNA-seq analysis using R
... Hello all, I'm a student and a beginer with R tool for RNA-seq analysis. I've some Fastq files that I want to (i) convert into BAM file using LIMMA package in R and (ii) make an alignment with genome reference using Toophat tool. The probleme is that, after reading the LIMMA userguide, I didn't cat ...
rnaseq limma convert R written 9 months ago by justinkablan2250 • updated 9 months ago by Gordon Smyth38k

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