User: jdshih

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jdshih20
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2 months, 3 weeks ago
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8 months, 3 weeks ago
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j*****@mdanderson.org

Posts by jdshih

<prev • 4 results • page 1 of 1 • next >
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Answer: A: Minfi issue: return code from pthread_create() is 22
... I had the same error using `oligo` and `affy`, and the source of the error appears to be `openblas >= 0.3.4`. You can see in your R session history that you are using `openblas 0.3.5`. For now, I'd replace `openblas` with `blas` until this problem is fixed upstream and the change is propagated t ...
written 3 months ago by jdshih20
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Answer: A: Oligo RMA normalization : ERROR; return code from pthread_create() is 22
... I struggled with the same error with `oligo` and `affy` for the past few days, resulting in a loss of not so insignificant amount of hair. The error occurs in `libpthread.so`, one of the shared libraries of `glibc`. Error code 22 indicates `EINVAL` (Invalid argument): ``` $ errno 22 EINVAL 22 Inval ...
written 3 months ago by jdshih20
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Comment: C: Bioconductor IP addresses for whitelist
... Unfortunately, our new cluster will not have a head node with Internet access; the admins will have temporary Internet access on special nodes until a unspecified date. The cluster will be a dead zone once Information Security is done with it... I'll look into mirroring the Bioconductor repository, ...
written 8 months ago by jdshih20
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Bioconductor IP addresses for whitelist
... The higher-ups at our institution (MD Anderson Cancer Center) have made the decision to disable Internet access on our computing cluster, and only allow incoming access to specific IP addresses. In order to install Bioconductor packages, we need a list of stable IP addresses for Bioconductor that w ...
ip firewall written 8 months ago by jdshih20

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