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Posts by syednajeebashraf
Comment: A: DEseq2 time-series design
... Thanks Michael, For the same experiment, I have run for 4 different Cell line. Out of these 4 Cell line, I am able to get gene with padj cutoff for 2 cellline while other 2 cell line, I didn't get any gene to lower then padj cutoff. For this two celline, I got gene with pval criteria but not padj. ...
... Hi All, I have time series study, where colData files look like cellLine dex timeStep batch 200142521 TF-1 CTRL 24 A 200142571 TF-1 IFN-g 24 A 200142621 TF-1 CTRL 48 A 200142661 TF-1 IFN-g 48 ...
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