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- German Cancer Research Center, Heidelberg, Germany
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Posts by cihan.erkut
... Perhaps you can try [surrogate variable analysis]? : http://bioconductor.org/packages/release/bioc/html/sva.html ...
... Hi everyone, I’m using DESeq2 to analyze RNA-Seq data. I have basically 2 factors: Genotype and Treatment. I build the design matrix as ~ Genotype * Treatment to capture interaction effects (Genotype:Treatment) as well. After correctly releveling the factors, I get the coefficients that I want. So ...
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