User: hamsasekar02

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Posts by hamsasekar02

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Contrast argument in DEseq
... Hello Sir, Thank you for your reply for the previous question. https://support.bioconductor.org/p/118839/ I have a small doubt Suppose i need to compare two genotypes at two points for two conditions (mock and infected), let the genotypes be A and B and the time point 4dpi and 2 dpi while conditi ...
deseq2 written 7 months ago by hamsasekar020 • updated 7 months ago by Michael Love25k
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Interaction term for condition, time point and genotypes together in DESeq2
... Hello Sir,. I have a transcriptome data with three conditions uninfected, mock and infected(x,y,z)for thre genotypes suppose (A,B,C) and three time point conditions (0day,2day,4day) . Which model should i put for these three so that i can see the interaction . The problem i am facing is that my unin ...
deseq2 written 7 months ago by hamsasekar020 • updated 7 months ago by Michael Love25k

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