User: a.karanikolou

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Posts by a.karanikolou

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Comment: C: affycoretools package, HTA 2.0 annotation query
... Is it mandatory to include "level = "core"" in the "getMainProbes(input, level = "core")? In the "help" menu, the argument "level" refers to "the summarization level used when calling rma". I'm not sure I understand it well on how to apply this argument in getMainProbes. ...
written 4 weeks ago by a.karanikolou0
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Comment: C: affycoretools package, HTA 2.0 annotation query
... Thank you for your help. ...
written 4 weeks ago by a.karanikolou0
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affycoretools package, HTA 2.0 annotation query
... Hi all, I have recently run the HTA 2.0 annotation using the two packages affycoretools and hta20transcriptcluster.db as outlined in the post https://support.bioconductor.org/p/89308/. However, I have run into an error after running the rma() as follows: ``` > exprs_mainProbes<-getMainProbes(e ...
annotation affy written 4 weeks ago by a.karanikolou0 • updated 4 weeks ago by James W. MacDonald50k

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