User: s.nielsen

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s.nielsen0
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Posts by s.nielsen

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Comment: C: BiomaRt and phytozome
... So with port 433, the web link works.. But through R it does not; > library(RCurl) > getURL('https://phytozome.jgi.doe.gov:443/biomart/martservice?type=registry&requestid=biomaRt') Error in function (type, msg, asError = TRUE) : error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tl ...
written 9 days ago by s.nielsen0
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Comment: C: BiomaRt and phytozome
... I think there may be a network issue at play here? I still have the error. I'm currently at my university. I may try at home and see what happens. ...
written 9 days ago by s.nielsen0
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BiomaRt and phytozome
... Any idea how to connect to phytozome through biomart? It seems to be an Rcurl problem when digging into the biomaRt code. Specifically, getURL. Something to do with SSL certificates? > library(biomaRt) > library(RCurl) > phyto <- "https://phytozome.jgi.doe.gov" > listMarts(host = phy ...
biomart rcurl phytozome written 10 days ago by s.nielsen0 • updated 10 days ago by Mike Smith3.6k

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