User: Edie Crosse

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Posts by Edie Crosse

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Comment: C: How to get the regression slope coefficient from DESeq2 analysis of continuous d
... Thank you very much for your response. We still have some questions regarding how to exctract correlation coefficients that will allow us to predict cell population numbers from gene expression. 1) We need R or R2 (correlation coefficient) and significance of this coefficient? How does this relate ...
written 4 months ago by Edie Crosse0
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How to get the regression slope coefficient from DESeq2 analysis of continuous data
... Hello, I have used DESeq2 to find genes where the expression level correlates with the size of a continous variable - in this case, the number of cells in a population (pop). We noticed that we have a batch effect in our data depending on what day we processed the experiment (day). So my design set ...
deseq2 written 5 months ago by Edie Crosse0 • updated 5 months ago by James W. MacDonald51k

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