User: alihakimzadeh73

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Posts by alihakimzadeh73

<prev • 5 results • page 1 of 1 • next >
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Comment: C: Differential gene expression using edgeR and using a generalised linear model (
... yes i get it, thank you so much! ...
written 26 days ago by alihakimzadeh730
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Comment: C: Differential gene expression using edgeR and using a generalised linear model (
... Thanks, dear Mikhael, I build the table not the matrix by bash code and put Id header which are names of my sample on top of them in excel and save as **CSV** file, and then I will do what you recommended. I hope it works, and I proceed to the next steps. ...
written 26 days ago by alihakimzadeh730
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Comment: C: Differential gene expression using edgeR and using a generalised linear model (
... @Mikhael.manurung thanks for your advice and reply and sorry for my late answer. I didn't see your response, so I do myself some steps, but they were no efficient that much! I change the names of counts.txt files and move them all into one **folder** and put **sample** numbers such as **1.txt, 2.txt ...
written 27 days ago by alihakimzadeh730
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Comment: C: Differential gene expression using edgeR and using a generalised linear model (
... Thanks for your comment. That is what my supervisor told me that there is no need to normalize your data. I am trying to stimulate the process done in one article( description: Differential gene expression was done using edgeR and using a generalized linear model (GLM) DE genes were identified usin ...
written 4 weeks ago by alihakimzadeh730
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Differential gene expression using edgeR and using a generalised linear model (GLM)
... Hi I am new to edgeR, and I don't have a basis so much in R programming since I used to work with python for my analysis. The counts that achieved from ht-seq for different samples stored in separate files and different folders; files names are all "counts.txt" and folders named as sample names. Co ...
edger glm written 4 weeks ago by alihakimzadeh730 • updated 4 weeks ago by Aaron Lun24k

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