User: jason.williams

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Posts by jason.williams

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Comment: C: unknown error in DiffBind package
... HI both, I have the same problem as Roberta. My bam.bai files are in the same folder as my bam alignments. I ran the following script: library("DiffBind") # read csv of sample sheet into dataframe samples <-read.csv(Extreme_Phenotype_H3K27Ac.csv) samples # Load and read the sample sheet DBdata ...
written 7 days ago by jason.williams0
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> DBdata <-dba(sampleSheet = samples) Error: object of type 'closure' is not subsettable
... Hi, I am using this vignette to guide me through differential ChIPSeq analysis - https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2018/ChIP/Practicals/Practical4_differentialBinding_DB.html Using this sample sheet in a .csv file ``` SampleID Tissue Factor Condition Treatmen ...
diffbind R r studio written 12 days ago by jason.williams0 • updated 11 days ago by James W. MacDonald50k

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