User: Ольга Камнева

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Posts by Ольга Камнева

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Analysis: two-color, time series
... Dear List, I need help with the analysis of time series experiment. I have cDNA microarray data produced with genepix. Bacterial cells were induced for sporulation (3 biological replicates), RNA was extracted from cells before induction and after 1,2,3 and 4 hours after induction. RNA from uninduce ...
microarray limma written 8.3 years ago by Ольга Камнева90
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Answer: A: help with metaArray package
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written 11.5 years ago by Ольга Камнева90
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help with metaArray package
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written 11.5 years ago by Ольга Камнева90
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Help with normalization
... Hi, All =) How can I perform normalization of data from different platforms together? I have data from affymetrix. I'd like to get equal distribution of these data sets. But I can't read *.CEL files from different platforms to one affyBath object. What should I do? Thanks a lot, Olga. ...
normalization written 11.6 years ago by Ольга Камнева90
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Answer: A: Normalisation for 2-set microarray
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written 11.6 years ago by Ольга Камнева90
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Normalisation for 2-set microarray
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written 11.6 years ago by Ольга Камнева90
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Help with intcor() function
... Hi, all, I need some suggestions =) I'd like to use package metaArray to perform meta-analysis. One of the tools of this package is integrative correlation analysis (proposed Parmigiani et al. in 2004), it allows to evaluat concordance of genes expression between studies. The main function is int ...
metaarray written 11.6 years ago by Ольга Камнева90 • updated 11.6 years ago by Rob Scharpf240
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Answer: A: Transcription factor binding site information
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written 11.6 years ago by Ольга Камнева90
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Transcription factor binding site information
... Hello, People! I need some help. How can I get the information about transcription factor binding sites into regulation region of certain gene? I'd like to get information only about proved sites, but not about supposed Sorry for my English, Looking forward for answers =) Olga ...
transcription written 11.6 years ago by Ольга Камнева90

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