User: spflanagan.phd

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Comment: C: Feedback on edgeR model setup: identifying sex-by-tissue effects
... Thank you for noting that I need to use the averages! To make things more difficult, it turns out that most of the samples are from individual donors, but two of the same donors were used to generate two separate tissue samples (so two donors gave both liver and skin tissue). That means that I have ...
written 11 weeks ago by spflanagan.phd0
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Feedback on edgeR model setup: identifying sex-by-tissue effects
... I have RNA-seq data from 5 males and 5 females for 4 tissue types (skin, liver, brain, and gonads), and I would like to: 1. Identify genes/transcripts with skin-biased expression 2. Identify genes/transcripts with sex-biased expression 3. Identify genes/transcripts with sex-biased expression in the ...
edger written 12 weeks ago by spflanagan.phd0 • updated 12 weeks ago by Aaron Lun25k

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