User: Charls

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Charls0
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Posts by Charls

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Comment: C: abnormal deseq2 normalization
... Thank you so much for your help. This parameter minReplicatesForReplace=Inf doesn't seem to work either. I'll try again with some other software. Best wishes! ...
written 11 days ago by Charls0
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abnormal deseq2 normalization
... Hi everyone, I've been trying to use DESeq2 to look at expression differences across different gene, with 17 samples across 2 groups. My count data looks as follows: > head(phylum_top10) NGm1 NGm2 NGm3 NGm4 NGm6 NGm7 NGm8 NGm9 NGs1 NGs2 NGs3 NGs4 NGs5 NGs6 NGs7 NGs8 NG ...
deseq2 written 12 days ago by Charls0 • updated 12 days ago by Michael Love24k

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