User: wiscoyogi

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timing when to use collapseReplicates in DESeq2
... I am using DESeq2 and have a genes x counts matrix where some of the columns are technical replicates. I want to use collapseReplicates, but I'm confused by the documentation about when to do it (e.g. after calling DESeqDataSetFromMatrix or on the raw counts table) the documentation( http://biocond ...
deseq2 written 8 weeks ago by wiscoyogi0 • updated 8 weeks ago by Michael Love25k

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