User: ryleehackley

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Posts by ryleehackley

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Comment: C: Integer overflow issue with ChIPQC
... update for anyone experiencing the same issues as me, reverting back to R 3.5, installing Rtools, and building and missing packages from the cran archive did the trick. My working session info and package versions are below. > packageurl <- "https://cran.r-project.org/src/contrib/Archive/ ...
written 6 days ago by ryleehackley0
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Comment: C: Integer overflow issue with ChIPQC
... I tried to run the older version 1.18.2 on R 3.5, but had an issue with DiffBind dependencies (amap doesn't seem to be compatible with 3.5) ...
written 6 days ago by ryleehackley0
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ChIPQC: issues with report generation and QC metrics
... Hello, I am trying to calculate the Fragment Length and Relative Cross-Coverage for a sequencing experiment using a non-model microbe. DNA was sheared to ~300bp during library prep, used single-end library sequencing, and my peaks were called using Mosaics in R (fragment length 300, bin size 200). ...
chipqc software error written 6 days ago by ryleehackley0

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