User: vm.higareda

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Posts by vm.higareda

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cpm filtering parameter
... I am doing a metatrancriptomic analysis, now I am analyzing the sequences corresponding to a parasite that live inside a host. I have millions of reads to the host but fewer reads of the parasite. My library size of parasite by replicate is around 193,000. I have seen that "As a rule of thumb, we ...
rnaseq edger transcriptomics cpm filtering metatranscriptomics written 8 weeks ago by vm.higareda0 • updated 8 weeks ago by Gordon Smyth39k
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Comment: C: gene dispersion, what does it mean?
... I am confused BCV in among replicates belonging to the same treatmet, eg, I have Treatment A ( 3 replicates) Treatment B ( 3 replicates). The BCV refer to variation between replicates of which treatment? ...
written 8 weeks ago by vm.higareda0
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12k
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Comment: C: gene dispersion, what does it mean?
... I am confused BCV in among replicates belonging to the same treatmet, eg, I have Treatment A ( 3 replicates) Treatment B ( 3 replicates). The BCV refer to variation between replicates of which treatment? ...
written 8 weeks ago by vm.higareda0

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