User: venura

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venura0
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Posts by venura

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Comment: C: Combining RSEM Files with dif row # for tximport
... Thank you. I will do that. ...
written 6 weeks ago by venura0
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Comment: C: Combining RSEM Files with dif row # for tximport
... Thank Michael! I agree. These data coming from an outside provider. They have provided RSEM output (.csv ). Their pipeline includes RSEM > DEseq2. I am trying to recreate their DESeq2 output (also provided as .csv). In a way this is me trying to see the reproducibility of their output. I apprec ...
written 6 weeks ago by venura0
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Combining RSEM Files with dif row # for tximport
... Hi, I have 4 .csv files containing gene level (transcripts collapsed) counts coming from infected (2 biological replicates) and non-infected (2 biological replicates) generated via RSEM. I dont have access to raw data files. Their contents are as follows; gene_id transcript_id(s) length expect ...
rnaseq deseq2 tximport written 6 weeks ago by venura0 • updated 6 weeks ago by Michael Love26k

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