User: zhangdengwei

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Posts by zhangdengwei

<prev • 8 results • page 1 of 1 • next >
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Comment: C: DiffBind without replicates
... Many thanks for your detailed interpretation. I got it. ...
written 26 days ago by zhangdengwei0
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Comment: C: Error: installation of package org.Mm.eg.db had non-zero exit status
... Maybe you can try it again using Rstudio, `Tools -> Install Packages`, not type in `install.packages()` though the Console interface. ...
written 26 days ago by zhangdengwei0
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Comment: C: Error: installation of package org.Mm.eg.db had non-zero exit status
... Sure. Mine is > inst <- installed.packages() > ridx <- inst[, "Package"] %in% c("RSQLite", "AnnotationDbi", "org.Mm.eg.db") > cidx <- c("Package", "LibPath", "Version") > inst[ ridx, cidx ] Package LibPath ...
written 26 days ago by zhangdengwei0
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DiffBind without replicates
... Hi, I am finding the differential peaks using DiffBind, but my sample has no replicates. And my `SampleSheet` is ``` > dbObj <- dba(sampleSheet="SampleSheet.csv") trisomy_21 fibroblasts trisomy_21 trisomy_21 trisomy_21 1 narrow euploid fibroblasts euploid euploid euploid 1 narrow > dbObj 2 ...
diffbind written 27 days ago by zhangdengwei0 • updated 27 days ago by Rory Stark2.9k
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Comment: C: Error: installation of package org.Mm.eg.db had non-zero exit status
... I finally fixed it by installing it from the local file using `install.packages()`. Thanks very much! ...
written 27 days ago by zhangdengwei0
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Comment: C: Error: installation of package org.Mm.eg.db had non-zero exit status
... I finally fixed it by installing it from the local file using `install.packages()`. Thanks very much! ...
written 27 days ago by zhangdengwei0
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Comment: C: Error: installation of package org.Mm.eg.db had non-zero exit status
... Thanks. My path does not contain Chinese characters, and I attached my command as follows: > getwd() [1] "C:/Users/zhangdengwei/Documents" > BiocManager::install("org.Mm.eg.db") Bioconductor version 3.8 (BiocManager 1.30.8), ?BiocManager::install for help Bioconductor vers ...
written 27 days ago by zhangdengwei0
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Error: installation of package org.Mm.eg.db had non-zero exit status
... hi, I am installing the package, `org.Mm.eg.db`, using the following command: BiocManager::install("org.Mm.eg.db") But I have got the warning and failed to install. My R version is 3.5.1. Warning message: In install.packages(...) : installation of package ‘org.Mm.eg.db’ had no ...
orgdb written 28 days ago by zhangdengwei0

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