User: albadrs.93

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albadrs.9310
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Posts by albadrs.93

<prev • 3 results • page 1 of 1 • next >
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PCA outliers cleaning
... Hii, I have been trying to analyse an available scRNA seq data set with the script they provided, however as a beginner it was not that intuitive for me so I decided to combine it with Seurat/SingleCellExperiment pipelines on my own and try to get a similar final outcome. Here is the available s ...
pipeline scrnaseq seurat singlecellexperiment written 11 days ago by albadrs.9310
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Comment: C: Error when calling AnnotationHub()
... That was indeed the problem! Thanks a lot ...
written 11 days ago by albadrs.9310
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Error when calling AnnotationHub()
... Hii, I am getting use to the Seurat scRNA seq pipeline and as I am trying to obtain gene names for cell cycle genes from Ensembl IDs, I have tried to use Annotation Hub R package to query Ensembl using the ensembldb R package All of the cell cycle genes are Ensembl IDs, but our gene IDs are the gen ...
annotation written 25 days ago by albadrs.9310 • updated 25 days ago by shepherl ♦♦ 1.7k

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