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Posts by ahsindoomilup
... In reality, these samples are stem cells generated from 1 Control and 1 Patient, and harvested at an undifferentiated or at a differentiated state, in order to determine the effect of the disease on cell development. Therefore, in this dataset, there are are no true biological replicates, but we are ...
... I am new to edgeR and am trying to create a design matrix for my dataset. I have read the manual and many discussion threads, but cant find a good match for my setup and am still unsure if I am using the correct design. I have a disease variable (Control vs Patient), a developmental timepoint vari ...
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