User: gaio.transposon

Reputation:
0
Status:
New User
Last seen:
2 weeks, 3 days ago
Joined:
3 weeks, 2 days ago
Email:
g**************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by gaio.transposon

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
56
views
0
answers
siamcat install problems
... Hi, I am aware that you guys are working on a soon to be released siamcat version. However, as I am impatient I am trying to work with the 1.6 version, but I am getting this error even when using your example data: install.packages("~/Downloads/SIAMCAT_1.6.0.tgz", repos = NULL, type = .Platf ...
siamcat written 18 days ago by gaio.transposon0
0
votes
0
answers
35
views
0
answers
siamcat - taxa IDs in check-associations plot
... Hi, thank you for making this very nice tool. I will most likely be using it with my data. I have a question: I am getting "spXXX" where X are numbers, for genomes /features when checking associations. Is there a way to use the taxa names I have instead? I am simply starting from a dataframe kin ...
labels siamcat written 18 days ago by gaio.transposon0
0
votes
1
answer
94
views
1
answers
Comment: C: DESeq2 - nested samples (individuals) - time course - conditions
... Hi Michael, I did try to apply the example from the vignette, but my output is not making sense when I plot it. For instance, I am getting genes that are DE at the same time point, while I am looking for genes that behave different in time between cohorts. This is my code so far: m3 <- mo ...
written 21 days ago by gaio.transposon0
0
votes
1
answer
94
views
1
answer
DESeq2 - nested samples (individuals) - time course - conditions
... Hi, I am using DESeq2, but unsure whether or not I am using the right design. I could not find here anything similar. **subject**: A, B, C, D, E, F **cohort**: ctrl, treatment **time**: 0, 1 As you can see subjects belong to either cohort (ctrl or treatment) and each subject is sampled at mult ...
deseq2 nested de written 22 days ago by gaio.transposon0 • updated 22 days ago by Michael Love26k

Latest awards to gaio.transposon

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 140 users visited in the last hour