User: Seth Falcon

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Seth Falcon150
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Posts by Seth Falcon

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Comment: C: org.Hs.eg.db
... On 5/22/10 10:55 AM, Uwe Ligges wrote: > It looks like both AnnotationDbi and RSQLite cannot be installed in a > library on a samba network share. Currently I have no idea why that > happens... This sounds like a SQLite/samba issue. https://bugs.launchpad.net/debian/+source/samba/+bug/117 ...
written 9.6 years ago by Seth Falcon150
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Answer: A: snapCGH, runBioHMM, Error: segfault from C stack overflow
... Hi Robert, On 3/15/10 6:46 AM, Ivanek, Robert wrote: > I tried to run the runBioHMM function on my data (Nimblegen HD 2.1 > Arrays), however I am always getting the error: "Error: segfault from C > stack overflow". You need to provide us with more information so that we can help you. A go ...
written 9.8 years ago by Seth Falcon150
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Answer: A: KEGGgraph fails on a KEGG XML file
... On 3/5/10 11:57 AM, Rajarshi Guha wrote: > Hi, I'm using KEGGgraph on R 2.9.0 (64 bit) on OS X 10.5.7. When > trying to read in the KEGG XML for hsa00051, I get the following > message: > >> parseKGML2Graph('hsa00051.xml', genesOnly=FALSE) > Error in UseMethod("xmlAttrs", node) ...
written 9.8 years ago by Seth Falcon150
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Comment: C: Failed installing SJava on MacOS
... Hi all, Michael, your debugging details inspired me and this morning Martin and had some time to dig for a solution. There were a couple of issues. The FindClass call was failing because the RForeignReference class depends on native code and the required "DLL" was not being found. The reason the ...
written 9.9 years ago by Seth Falcon150
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Comment: C: IRanges causes bug in complete.cases
... On 12/11/09 4:54 PM, Michael Lawrence wrote: > On Fri, Dec 11, 2009 at 2:10 PM, Seth Falcon wrote: > >> On 12/10/09 12:17 PM, Kasper Daniel Hansen wrote: >> >>> After loading IRanges, complete.cases ceases to work (see below). >>> Test via example("complete.cases" ...
written 10.0 years ago by Seth Falcon150
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Answer: A: (no subject)
... Hi Jonathan, On Thu, Nov 26, 2009 at 5:55 AM, Jonathan Sive wrote: > I'm having difficulties download Bioconductor onto an OpenSUSE 11.1 system. > Many of the Biobase component packages install fine, but the full set won't download, nor will other Bioconductor packages eg GEOquery. > > ...
written 10.0 years ago by Seth Falcon150
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Comment: C: problem connecting to bioMart - NOT proxy error
... Hi Jenny, On Thu, Nov 19, 2009 at 8:47 AM, Jenny Drnevich wrote: > Thanks for your help. I'm on a desktop, so I don't think I can connect from > a different network. Hey, that's what extension cords are for ;-) > The odd thing is that when I started my computer this > morning, I was ...
written 10.1 years ago by Seth Falcon150
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Answer: A: Supressing welcome to bioconductor message?
... Hi Jeff, On 10/22/09 10:45 AM, Jeff Gentry wrote: > I could have sworn that I've seen this before, but my google-fu is failing > me at the moment. How can I suppress the "Welcome to > Bioconductor" message when BioC loads? Is this what you are looking for? > suppressMessages(lib ...
written 10.1 years ago by Seth Falcon150
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Comment: C: "Size" in summary() of "hyperGTest()
... * On 2009-02-19 at 00:54 +0000 Sergei Manakov wrote: > Thanks for your reply. You are right, indeed I have used conditional = > TRUE, and that is the reason why "Size" differs. Sorry about that, I > should have guessed that myself. However, I find the description of > the option "condit ...
written 10.8 years ago by Seth Falcon150
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Comment: C: Drawing induced GO graphs
... * Wolfgang: > > AfaIu, plotGOTermGraph wants to work on elements of the list y, > > not on y itself. I agree that the documentation in the function's > > manual page ("g : A graph object as returned by inducedTermGraph > > or termGraphs") would benefit from clarification/corr ...
written 11.3 years ago by Seth Falcon150

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