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0
votes
1
reply
1.4k
views
Answer:
A: Counting reads for edgeR or voom()
13.4 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
3.9k
views
Comment:
C: R 2.15.1 ReadAffy error
13.4 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
3.9k
views
Comment:
C: R 2.15.1 ReadAffy error
13.4 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
2
replies
3.9k
views
Comment:
C: R 2.15.1 ReadAffy error
13.4 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
3.9k
views
Comment:
C: R 2.15.1 ReadAffy error
13.4 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
6.6k
views
Comment:
C: Unable to open database file, cummeRbund error.
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
2.0k
views
Comment:
C: matrix like object with Rle columns
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
2.0k
views
Comment:
C: matrix like object with Rle columns
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
2.0k
views
Comment:
C: matrix like object with Rle columns
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
2
replies
2.0k
views
Comment:
C: matrix like object with Rle columns
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
13
replies
2.0k
views
matrix like object with Rle columns
updated 13.5 years ago by
Michael Lawrence
★ 11k • written 13.5 years ago by
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.6k
views
Answer:
A: CQN Package
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.1k
views
Comment:
C: BSgenome packages for new UCSC rn5 and galGal4 assemblies
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.1k
views
Answer:
A: BSgenome packages for new UCSC rn5 and galGal4 assemblies
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
3.8k
views
voom() vs. RPKM/FPKM or otherwise normalized counts, and GC correction, when fitting models to a small number of responses (per-feature counts)
Normalization
graph
limma
convert
edgeR
DESeq
Rsubread
Normalization
graph
limma
convert
updated 2.9 years ago by
Gordon Smyth
53k • written 13.5 years ago by
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.3k
views
Comment:
C: Create A Stranded probeAnno Object
13.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
2.5k
views
Comment:
C: necessity of moderated t statistic and false discoveries for small predefined ge
13.6 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.7k
views
Comment:
C: v is for values()
13.6 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
3.7k
views
Comment:
C: help with reduction operation using IRanges/GRanges
13.6 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
3.7k
views
Comment:
C: help with reduction operation using IRanges/GRanges
13.6 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
3.7k
views
Answer:
A: help with reduction operation using IRanges/GRanges
13.6 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.7k
views
Comment:
C: Genominator error when calling syste.time
13.7 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.7k
views
Comment:
C: Genominator error when calling syste.time
13.7 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.7k
views
Answer:
A: Genominator error when calling syste.time
13.7 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
2.2k
views
Comment:
C: Install error affxparser for R 2.15
13.7 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.0k
views
Answer:
A: New to Bioconductor is there a better way?
13.7 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
2.7k
views
Comment:
C: question about biomaRt problem
13.7 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
2.0k
views
Comment:
C: re incomplete analysis in Deseq
13.8 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
2.0k
views
Comment:
C: re incomplete analysis in Deseq
13.8 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
2.0k
views
Answer:
A: re incomplete analysis in Deseq
13.8 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
3.4k
views
Comment:
C: convert between MethylLumiSet (methylumi) and RGChannelSet (minfi)
13.8 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.4k
views
Answer:
A: besides batch effects, whether adjust for specific quality metric variables (pos
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.7k
views
Comment:
C: Minimal region of overlap between two GRanges objects
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
5.0k
views
Comment:
C: PCA to remove batch effect.
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
2
replies
5.0k
views
Comment:
C: PCA to remove batch effect.
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.2k
views
Answer:
A: some basic questions
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.4k
views
Comment:
C: biocLite, ask=FALSE bug
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
5
replies
1.4k
views
biocLite, ask=FALSE bug
updated 14.0 years ago by
Dan Tenenbaum
★ 8.2k • written 14.0 years ago by
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.2k
views
Answer:
A: installation of bioconductopr packages fails
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
6.0k
views
Comment:
C: GRanges - coercion from dataframe
14.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
13k
views
Comment:
C: GRanges - reduce() function
14.1 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
793
views
Answer:
A: package Genominator with ShortRead-annotation question
14.1 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.4k
views
Answer:
A: readCelFile function in Starr is crashing R
14.1 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.1k
views
Answer:
A: Identifying the genome sequence of an affy probe
14.1 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
2.6k
views
Answer:
A: Installing packages on R v2.13.2, OSX multiple warning messages
14.2 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
7.4k
views
Answer:
A: how to update a bioconductor package
14.2 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.3k
views
Answer:
A: present / absent calls and detection p-values
14.2 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
2.6k
views
Answer:
A: installing Rgraphviz under CentOS 5.6
14.2 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
0
replies
1.3k
views
Comment:
C: biocLite
14.2 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.3k
views
Comment:
C: biocLite
14.2 years ago
Kasper Daniel Hansen
★ 6.5k
733 results • Page
7 of 15
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