User: Glyn Bradley

gravatar for Glyn Bradley
Glyn Bradley40
Reputation:
40
Status:
New User
Location:
Last seen:
10 years, 1 month ago
Joined:
11 years, 3 months ago
Email:
g*******@mycib.ac.uk

Posts by Glyn Bradley

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
397
views
0
answers
Expression values from gcRMA are different than before
... Hi all I'm running gcRMA via affylmGUI on data from the ATH1 chip The expression levels I get now are very slightly different to those I got at the end of last year. I'm assuming something has been updated, but does anyone know what exactly? Is it the implementation of gcRMA, or is it more likely t ...
gcrma affylmgui written 10.1 years ago by Glyn Bradley40
0
votes
0
answers
364
views
0
answers
affylmGUI error
... Hi all I've seen this asked before in relation to limma but I couldn't find an answer so... I'm getting this warning 8 times in the R console when I quit out of affylmGUI after computing contrasts and exporting toptables In ebayes(fit = fit, proportion = proportion, stdev.coef.lim = stdev.coef.lim ...
limma written 10.5 years ago by Glyn Bradley40
0
votes
0
answers
485
views
0
answers
limma design and biolrep matrix, duplicateCorrelation
... Hi all Sorry I've asked on this topic before but I'm still confused. This time... 6 Imagene arrays. Targets file : "Name " "FileNameCy3" "FileNameCy5" "Cy3" "Cy5" "5636-T56-Br.1-3.txt" "5636-P119-Br.1-5.txt" "T56" "P119" "2280-P ...
written 11.3 years ago by Glyn Bradley40
0
votes
1
answer
492
views
1
answer
gcrma problem
... Hi all, I'm using a custom affy chip, I have made the cdf using makecdfenv, installed it using R CMD INSTALL ..., and I can use the package affy sucessfully to do rma normalisations etc, but when trying to carry out gcrma in with the package gcrma, I get : eset <- gcrma(Data) Adjusting for op ...
cdf affy makecdfenv gcrma written 11.3 years ago by Glyn Bradley40 • updated 11.3 years ago by James W. MacDonald51k

Latest awards to Glyn Bradley

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 282 users visited in the last hour