User: Zhang,Jiexin
Zhang,Jiexin • 20
- Reputation:
- 20
- Status:
- New User
- Location:
- United States
- Last seen:
- 10 years, 8 months ago
- Joined:
- 10 years, 8 months ago
- Email:
- j**********@mdanderson.org
Posts by Zhang,Jiexin
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... Hi,
I am using biomaRt to extract genomic locations for genes of interest. I found that it doesn't work on ncRNAs. For example, I have MRPL45P2 in my gene list, couldn't find anything.
> x <- 'MRPL45P2'
> addCol <- c('refseq_ncrna','chromosome_name','start_position','end_position','st ...
written 4.2 years ago by
Zhang,Jiexin • 20
• updated
4.2 years ago by
Thomas Maurel • 770
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... Thanks a lot for your help!
Jiexin
***********************************************************
To do great work, you have to have a pure mind.
Everything else is human weakness.
--
Mikhail Gromov
************************************* ...
written 10.7 years ago by
Zhang,Jiexin • 20
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... Dear all,
I've been having difficulty extracting gene symbol using nuID. I've
tried human and mouse, neither of them works. For example:
> nuID # a nuID from mouse data
[1] "WVEy90fXI4J7yrxXpk"
> getSYMBOL(nuID,'lumiMouseAll.db')
Error in lookUp(x, data, "SYMBOL") : SYMBOL is an invalid elem ...
written 10.7 years ago by
Zhang,Jiexin • 20
• updated
10.7 years ago by
Sean Davis ♦ 21k
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