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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
10.9 years ago Tim Triche ★ 4.2k
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Answer: A: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
10.9 years ago Tim Triche ★ 4.2k
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Answer: A: Cell-type enrichment for gene expression
10.9 years ago Tim Triche ★ 4.2k
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Comment: C: preprocess core for quantile normalization
11.0 years ago Tim Triche ★ 4.2k
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Answer: A: preprocess core for quantile normalization
11.0 years ago Tim Triche ★ 4.2k
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3.2k
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Comment: C: QuasR: how to use an indexed reference genome?
11.0 years ago Tim Triche ★ 4.2k
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Comment: C: Statistics question for multi-factor interaction test in edgeR
11.0 years ago Tim Triche ★ 4.2k
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Comment: C: Statistics question for multi-factor interaction test in edgeR
11.0 years ago Tim Triche ★ 4.2k
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2.1k
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Answer: A: Nearest Template Prediction?
11.0 years ago Tim Triche ★ 4.2k
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Answer: A: advantages of annotation packages
11.0 years ago Tim Triche ★ 4.2k
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1
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629
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silly question about AnnotationDbi/seqnames.db
updated 11.0 years ago by ★ 7.2k • written 11.0 years ago by ★ 4.2k
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Answer: A: Fwd: feature weights in 'superpc' package
11.0 years ago Tim Triche ★ 4.2k
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1.5k
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Comment: C: Analyzing "differential variability" of methylation (and gene expression)
11.0 years ago Tim Triche ★ 4.2k
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1
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978
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loss of stranding in alignments from recent versions of Rsubread
Alignment Alignment
updated 11.1 years ago by ★ 3.6k • written 11.1 years ago by ★ 4.2k
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MethyLumiSet object
convert genoset minfi convert genoset minfi
11.1 years ago Tim Triche ★ 4.2k
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Answer: A: MethyLumiSet object
11.1 years ago Tim Triche ★ 4.2k
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Comment: C: Fwd: GO terms: Annotation for HumanMethylation450
11.1 years ago Tim Triche ★ 4.2k
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Fwd: GO terms: Annotation for HumanMethylation450
Annotation Pathways GO probe annotate Annotation Pathways GO probe annotate
updated 11.1 years ago by ▴ 110 • written 11.1 years ago by ★ 4.2k
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Answer: A: Fwd: GO terms: Annotation for HumanMethylation450
11.1 years ago Tim Triche ★ 4.2k
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927
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Comment: C: Fwd: GO terms: Annotation for HumanMethylation450
11.1 years ago Tim Triche ★ 4.2k
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1.8k
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Comment: C: IlluminaHumanMethylation450kprobe for nearest TSS calculation question
11.1 years ago Tim Triche ★ 4.2k
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2.1k
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Answer: A: GO terms: Annotation for HumanMethylation450
11.1 years ago Tim Triche ★ 4.2k
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1.3k
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Comment: C: Analyzing "differential variability" of methylation (and gene expression)
11.1 years ago Tim Triche ★ 4.2k
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883
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Answer: A: (minfi) Return value from dmpFinder
11.2 years ago Tim Triche ★ 4.2k
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1.7k
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Comment: C: methyAnalysis - changes to GenoSet
11.2 years ago Tim Triche ★ 4.2k
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1.8k
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Answer: A: IlluminaHumanMethylation450kprobe for nearest TSS calculation question
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: [Rd] enabling reproducible research & R package management & install.package.ver
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: BSgenome.Dmelanogaster.UCSC.dm3 in R 3.0
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: BSgenome.Dmelanogaster.UCSC.dm3 in R 3.0
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: Bumphunter and minfi
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: Bumphunter and minfi
11.2 years ago Tim Triche ★ 4.2k
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Answer: A: Package DRC: multiple treatment groups
11.2 years ago Tim Triche ★ 4.2k
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Answer: A: Finding closest gene to chromosomal position (non-human or mouse)
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: subset GRanges object via ElementMetadata
11.2 years ago Tim Triche ★ 4.2k
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7.3k
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Answer: A: subset GRanges object via ElementMetadata
11.2 years ago Tim Triche ★ 4.2k
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Comment: C: What happened to GenomicFeatures::spliceGraph?
11.2 years ago Tim Triche ★ 4.2k
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1.6k
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Answer: A: What happened to GenomicFeatures::spliceGraph?
11.2 years ago Tim Triche ★ 4.2k
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3.4k
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Answer: A: Generate a GRangesList from a classical list of GRangesObjects
11.2 years ago Tim Triche ★ 4.2k
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Answer: A: Problem of Ctrl+L in RStudio:
11.2 years ago Tim Triche ★ 4.2k
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847
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Comment: C: curious behavior from VariantAnnotation 1.5.36
11.3 years ago Tim Triche ★ 4.2k
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662
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A properly reproducible example of bizarre VariantAnnotation behavior
GO GO
11.3 years ago Tim Triche ★ 4.2k
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3
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847
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curious behavior from VariantAnnotation 1.5.36
GO BSgenome BSgenome GO BSgenome BSgenome
11.3 years ago Tim Triche ★ 4.2k
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847
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Answer: A: curious behavior from VariantAnnotation 1.5.36
11.3 years ago Tim Triche ★ 4.2k
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1.2k
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(missing?) UCSCKG -> SYMBOL mappings in Homo.sapiens (etc.)
Organism GenomicFeatures Organism GenomicFeatures
updated 11.3 years ago by ★ 7.2k • written 11.3 years ago by ★ 4.2k
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2.4k
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Comment: C: question about Gviz
11.3 years ago Tim Triche ★ 4.2k
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2.4k
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Comment: C: question about Gviz
11.3 years ago Tim Triche ★ 4.2k
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1.4k
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Comment: C: VariantAnnotation package with snp location
11.3 years ago Tim Triche ★ 4.2k
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1.4k
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Answer: A: VariantAnnotation package with snp location
11.3 years ago Tim Triche ★ 4.2k
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2.2k
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Comment: C: gmapR/gsnap crashes
11.3 years ago Tim Triche ★ 4.2k
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2
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2.2k
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gmapR/gsnap crashes
gmapR gmapR
updated 11.3 years ago by ★ 11k • written 11.3 years ago by ★ 4.2k
430 results • Page 3 of 9
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